Please update wsusou to the newest version and rerun UpdateGenerator as a few problems with the software were fixed. Therefore wsusou has a self updater. If you run UpdateGenerator, it will ask you to update wsusou to version 9.1.
"Just prepare ISO": this will skip the download a just create a new ISO file.
"Only create collection script": this will generate a script, you can run as a sheduled task
"Clean up download directory": this will delete superseded updates (I really recommend you to enable this)
"Clean up target": the same as clean up download, but it will clean the usb target dir (if you enabled the copy to usb option)